Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm45118-201ENSMUST00000208928 825 ntBASIC12.01□□□□□ -0.49
Sftpa1P35242 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm8712-201ENSMUST00000221090 701 ntBASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.01□□□□□ -0.49
Sftpa1P35242 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm22058-201ENSMUST00000083393 310 ntBASIC12.01□□□□□ -0.49
Sftpa1P35242 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.01□□□□□ -0.49
Sftpa1P35242 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sftpa1P35242 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12□□□□□ -0.49
Sftpa1P35242 Gm43399-201ENSMUST00000202546 2374 ntBASIC12□□□□□ -0.49
Sftpa1P35242 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
Sftpa1P35242 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12□□□□□ -0.49
Sftpa1P35242 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sftpa1P35242 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12□□□□□ -0.49
Sftpa1P35242 Gm8856-201ENSMUST00000185254 1144 ntBASIC12□□□□□ -0.49
Sftpa1P35242 Gm8099-201ENSMUST00000200510 742 ntBASIC12□□□□□ -0.49
Sftpa1P35242 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12□□□□□ -0.49
Sftpa1P35242 Gm10702-201ENSMUST00000098929 1268 ntBASIC12□□□□□ -0.49
Sftpa1P35242 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sftpa1P35242 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sftpa1P35242 Daam2-202ENSMUST00000224595 1926 ntBASIC11.99□□□□□ -0.49
Sftpa1P35242 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.99□□□□□ -0.49
Sftpa1P35242 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.99□□□□□ -0.49
Sftpa1P35242 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.99□□□□□ -0.49
Sftpa1P35242 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.99□□□□□ -0.49
Sftpa1P35242 Gm25043-201ENSMUST00000158604 212 ntBASIC11.99□□□□□ -0.49
Sftpa1P35242 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.99□□□□□ -0.49
Sftpa1P35242 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.99□□□□□ -0.49
Sftpa1P35242 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.99□□□□□ -0.49
Sftpa1P35242 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sftpa1P35242 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.99□□□□□ -0.49
Sftpa1P35242 Gm44405-201ENSMUST00000198952 126 ntBASIC11.99□□□□□ -0.49
Sftpa1P35242 AU022133-201ENSMUST00000200601 873 ntBASIC11.99□□□□□ -0.49
Sftpa1P35242 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.99□□□□□ -0.49
Sftpa1P35242 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.99□□□□□ -0.49
Sftpa1P35242 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.99□□□□□ -0.49
Sftpa1P35242 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sftpa1P35242 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sftpa1P35242 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.99□□□□□ -0.49
Sftpa1P35242 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Sftpa1P35242 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sftpa1P35242 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sftpa1P35242 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms