Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Gm27306-201ENSMUST00000183970 107 ntBASIC11.21□□□□□ -0.61
Slc6a1P31648 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.21□□□□□ -0.61
Slc6a1P31648 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.21□□□□□ -0.62
Slc6a1P31648 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Slc6a1P31648 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Slc6a1P31648 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Slc6a1P31648 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Slc6a1P31648 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.62
Slc6a1P31648 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Slc6a1P31648 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Slc6a1P31648 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Slc6a1P31648 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.2□□□□□ -0.62
Slc6a1P31648 BC001981-202ENSMUST00000191393 1545 ntBASIC11.2□□□□□ -0.62
Slc6a1P31648 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Slc6a1P31648 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Slc6a1P31648 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.2□□□□□ -0.62
Slc6a1P31648 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.2□□□□□ -0.62
Slc6a1P31648 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.2□□□□□ -0.62
Slc6a1P31648 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Slc6a1P31648 Gm20949-201ENSMUST00000206478 952 ntBASIC11.2□□□□□ -0.62
Slc6a1P31648 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Slc6a1P31648 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc6a1P31648 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.19□□□□□ -0.62
Slc6a1P31648 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.19□□□□□ -0.62
Slc6a1P31648 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Gm5566-201ENSMUST00000116118 459 ntBASIC11.19□□□□□ -0.62
Slc6a1P31648 Gm15653-201ENSMUST00000119247 907 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms