Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VtnP29788 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VtnP29788 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VtnP29788 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
VtnP29788 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VtnP29788 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VtnP29788 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
VtnP29788 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
VtnP29788 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.81□□□□□ -0.52
VtnP29788 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.81□□□□□ -0.52
VtnP29788 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.81□□□□□ -0.52
VtnP29788 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.81□□□□□ -0.52
VtnP29788 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.81□□□□□ -0.52
VtnP29788 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.81□□□□□ -0.52
VtnP29788 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
VtnP29788 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.81□□□□□ -0.52
VtnP29788 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.81□□□□□ -0.52
VtnP29788 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.81□□□□□ -0.52
VtnP29788 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.81□□□□□ -0.52
VtnP29788 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.81□□□□□ -0.52
VtnP29788 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.81□□□□□ -0.52
VtnP29788 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.81□□□□□ -0.52
VtnP29788 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
VtnP29788 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
VtnP29788 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.81□□□□□ -0.52
VtnP29788 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VtnP29788 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
VtnP29788 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.8□□□□□ -0.52
VtnP29788 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VtnP29788 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
VtnP29788 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.8□□□□□ -0.52
VtnP29788 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.8□□□□□ -0.52
VtnP29788 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Gm12203-201ENSMUST00000118235 598 ntBASIC11.8□□□□□ -0.52
VtnP29788 Gm12209-201ENSMUST00000120089 596 ntBASIC11.8□□□□□ -0.52
VtnP29788 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.8□□□□□ -0.52
VtnP29788 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.8□□□□□ -0.52
VtnP29788 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.8□□□□□ -0.52
VtnP29788 Gm6458-201ENSMUST00000211573 635 ntBASIC11.8□□□□□ -0.52
VtnP29788 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.8□□□□□ -0.52
VtnP29788 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.8□□□□□ -0.52
VtnP29788 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
VtnP29788 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.8□□□□□ -0.52
VtnP29788 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.8□□□□□ -0.52
VtnP29788 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
VtnP29788 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.8□□□□□ -0.52
VtnP29788 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
VtnP29788 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
VtnP29788 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VtnP29788 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VtnP29788 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
VtnP29788 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VtnP29788 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VtnP29788 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VtnP29788 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms