Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Gm43818-201ENSMUST00000200605 466 ntBASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Gm40466-201ENSMUST00000212174 422 ntBASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1bP25119 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Gm16177-201ENSMUST00000120728 718 ntBASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Gm25857-201ENSMUST00000082788 129 ntBASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1bP25119 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms