Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxb3P09026 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxb3P09026 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb3P09026 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxb3P09026 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb3P09026 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb3P09026 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb3P09026 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb3P09026 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb3P09026 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb3P09026 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb3P09026 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hoxb3P09026 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb3P09026 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Hoxb3P09026 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Hoxb3P09026 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb3P09026 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Hoxb3P09026 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb3P09026 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb3P09026 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Hoxb3P09026 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb3P09026 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb3P09026 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.02□□□□□ -0.33
Hoxb3P09026 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxb3P09026 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.02□□□□□ -0.33
Hoxb3P09026 Gm13570-201ENSMUST00000140763 309 ntBASIC13.02□□□□□ -0.33
Hoxb3P09026 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxb3P09026 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.02□□□□□ -0.33
Hoxb3P09026 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hoxb3P09026 Gm38018-201ENSMUST00000195651 540 ntBASIC13.02□□□□□ -0.33
Hoxb3P09026 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Gm43222-201ENSMUST00000199013 603 ntBASIC13.02□□□□□ -0.33
Hoxb3P09026 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.02□□□□□ -0.33
Hoxb3P09026 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.02□□□□□ -0.33
Hoxb3P09026 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.02□□□□□ -0.33
Hoxb3P09026 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Hoxb3P09026 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Hoxb3P09026 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxb3P09026 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hoxb3P09026 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.02□□□□□ -0.33
Hoxb3P09026 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.02□□□□□ -0.33
Hoxb3P09026 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxb3P09026 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb3P09026 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Hoxb3P09026 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Hoxb3P09026 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxb3P09026 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hoxb3P09026 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.01□□□□□ -0.33
Hoxb3P09026 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.01□□□□□ -0.33
Hoxb3P09026 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxb3P09026 AC165260.5-201ENSMUST00000224640 1247 ntBASIC13.01□□□□□ -0.33
Hoxb3P09026 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Hoxb3P09026 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hoxb3P09026 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxb3P09026 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Hoxb3P09026 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb3P09026 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms