Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Hcn1O88704 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Hcn1O88704 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Hcn1O88704 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Gm15371-201ENSMUST00000117057 784 ntBASIC12.49□□□□□ -0.41
Hcn1O88704 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.49□□□□□ -0.41
Hcn1O88704 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Hcn1O88704 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.49□□□□□ -0.41
Hcn1O88704 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Gm38223-201ENSMUST00000194484 695 ntBASIC12.49□□□□□ -0.41
Hcn1O88704 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.49□□□□□ -0.41
Hcn1O88704 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.49□□□□□ -0.41
Hcn1O88704 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcn1O88704 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Gm15806-201ENSMUST00000120696 955 ntBASIC12.48□□□□□ -0.41
Hcn1O88704 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hcn1O88704 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.48□□□□□ -0.41
Hcn1O88704 Gm6983-201ENSMUST00000214912 628 ntBASIC12.48□□□□□ -0.41
Hcn1O88704 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.48□□□□□ -0.41
Hcn1O88704 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hcn1O88704 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hcn1O88704 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.48□□□□□ -0.41
Hcn1O88704 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.48□□□□□ -0.41
Hcn1O88704 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcn1O88704 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.47□□□□□ -0.41
Hcn1O88704 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Hcn1O88704 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.47□□□□□ -0.41
Hcn1O88704 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hcn1O88704 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hcn1O88704 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.47□□□□□ -0.41
Hcn1O88704 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.47□□□□□ -0.41
Hcn1O88704 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Hcn1O88704 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Hcn1O88704 Gm9002-201ENSMUST00000178437 499 ntBASIC12.47□□□□□ -0.41
Hcn1O88704 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Gm8463-201ENSMUST00000208573 613 ntBASIC12.47□□□□□ -0.41
Hcn1O88704 Gm5186-201ENSMUST00000218781 920 ntBASIC12.47□□□□□ -0.41
Hcn1O88704 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.47□□□□□ -0.41
Hcn1O88704 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms