Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.95□□□□□ -0.34
Ldb2O55203 Gm27839-201ENSMUST00000184242 106 ntBASIC12.95□□□□□ -0.34
Ldb2O55203 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb2O55203 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.95□□□□□ -0.34
Ldb2O55203 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.95□□□□□ -0.34
Ldb2O55203 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Ldb2O55203 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.95□□□□□ -0.34
Ldb2O55203 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb2O55203 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb2O55203 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb2O55203 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.95□□□□□ -0.34
Ldb2O55203 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ldb2O55203 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ldb2O55203 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb2O55203 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb2O55203 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ldb2O55203 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb2O55203 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.94□□□□□ -0.34
Ldb2O55203 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.94□□□□□ -0.34
Ldb2O55203 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.94□□□□□ -0.34
Ldb2O55203 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 Gm27331-201ENSMUST00000183705 60 ntBASIC12.94□□□□□ -0.34
Ldb2O55203 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.94□□□□□ -0.34
Ldb2O55203 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.94□□□□□ -0.34
Ldb2O55203 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.94□□□□□ -0.34
Ldb2O55203 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ldb2O55203 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb2O55203 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.93□□□□□ -0.34
Ldb2O55203 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.93□□□□□ -0.34
Ldb2O55203 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Ldb2O55203 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Ldb2O55203 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ldb2O55203 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.93□□□□□ -0.34
Ldb2O55203 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ldb2O55203 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.93□□□□□ -0.34
Ldb2O55203 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.93□□□□□ -0.34
Ldb2O55203 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 Gm27847-201ENSMUST00000183711 107 ntBASIC12.93□□□□□ -0.34
Ldb2O55203 Gm27375-201ENSMUST00000183799 107 ntBASIC12.93□□□□□ -0.34
Ldb2O55203 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.93□□□□□ -0.34
Ldb2O55203 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.93□□□□□ -0.34
Ldb2O55203 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.93□□□□□ -0.34
Ldb2O55203 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 Gm6091-201ENSMUST00000098307 165 ntBASIC12.93□□□□□ -0.34
Ldb2O55203 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb2O55203 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms