Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl13O55038 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl13O55038 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl13O55038 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cxcl13O55038 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl13O55038 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl13O55038 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl13O55038 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcl13O55038 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl13O55038 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl13O55038 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcl13O55038 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Cxcl13O55038 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Cxcl13O55038 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11□□□□□ -0.65
Cxcl13O55038 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cxcl13O55038 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Gm10434-201ENSMUST00000101158 471 ntBASIC11□□□□□ -0.65
Cxcl13O55038 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11□□□□□ -0.65
Cxcl13O55038 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11□□□□□ -0.65
Cxcl13O55038 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Gm6621-201ENSMUST00000193251 772 ntBASIC11□□□□□ -0.65
Cxcl13O55038 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cxcl13O55038 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11□□□□□ -0.65
Cxcl13O55038 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cxcl13O55038 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cxcl13O55038 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cxcl13O55038 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cxcl13O55038 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl13O55038 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.99□□□□□ -0.65
Cxcl13O55038 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.99□□□□□ -0.65
Cxcl13O55038 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.99□□□□□ -0.65
Cxcl13O55038 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Gm23363-201ENSMUST00000175024 79 ntBASIC10.99□□□□□ -0.65
Cxcl13O55038 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Gm5904-201ENSMUST00000210286 865 ntBASIC10.99□□□□□ -0.65
Cxcl13O55038 Morn2-202ENSMUST00000227729 656 ntBASIC10.99□□□□□ -0.65
Cxcl13O55038 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms