Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm43125-201ENSMUST00000201724 730 ntBASIC11.83□□□□□ -0.52
Matn3O35701 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.83□□□□□ -0.52
Matn3O35701 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Matn3O35701 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Matn3O35701 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.83□□□□□ -0.52
Matn3O35701 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.83□□□□□ -0.52
Matn3O35701 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Matn3O35701 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.83□□□□□ -0.52
Matn3O35701 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.83□□□□□ -0.52
Matn3O35701 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.83□□□□□ -0.52
Matn3O35701 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.83□□□□□ -0.52
Matn3O35701 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.83□□□□□ -0.52
Matn3O35701 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Matn3O35701 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Matn3O35701 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.83□□□□□ -0.52
Matn3O35701 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.83□□□□□ -0.52
Matn3O35701 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.82□□□□□ -0.52
Matn3O35701 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Matn3O35701 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Matn3O35701 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.82□□□□□ -0.52
Matn3O35701 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.82□□□□□ -0.52
Matn3O35701 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.82□□□□□ -0.52
Matn3O35701 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.82□□□□□ -0.52
Matn3O35701 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Gm38225-201ENSMUST00000194001 393 ntBASIC11.82□□□□□ -0.52
Matn3O35701 Gm6916-202ENSMUST00000205523 195 ntBASIC11.82□□□□□ -0.52
Matn3O35701 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.82□□□□□ -0.52
Matn3O35701 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.82□□□□□ -0.52
Matn3O35701 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.82□□□□□ -0.52
Matn3O35701 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Matn3O35701 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Matn3O35701 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Matn3O35701 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Matn3O35701 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.81□□□□□ -0.52
Matn3O35701 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Matn3O35701 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Matn3O35701 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms