Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Gm12260-201ENSMUST00000122447 411 ntBASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Gm27628-201ENSMUST00000184911 107 ntBASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Gm10548-201ENSMUST00000097631 2629 ntBASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
Trim55G3X8Y1 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Gm11764-201ENSMUST00000120221 623 ntBASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms