Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Gm12341-201ENSMUST00000119724 503 ntBASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Gm37917-201ENSMUST00000194711 392 ntBASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Gm44397-201ENSMUST00000195950 113 ntBASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Gm6983-201ENSMUST00000214912 628 ntBASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Gm14350-201ENSMUST00000116642 640 ntBASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Gm5687-201ENSMUST00000118252 640 ntBASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh9F8VPK8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh9F8VPK8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Pcdh9F8VPK8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh9F8VPK8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Pcdh9F8VPK8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.27
Pcdh9F8VPK8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Gm18307-201ENSMUST00000206864 949 ntBASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Gm18624-201ENSMUST00000220966 658 ntBASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms