Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm11918-201ENSMUST00000121660 179 ntBASIC13.39□□□□□ -0.27
Atf6F6VAN0 Gm11978-201ENSMUST00000122315 466 ntBASIC13.39□□□□□ -0.27
Atf6F6VAN0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Gm38671-201ENSMUST00000200573 130 ntBASIC13.39□□□□□ -0.27
Atf6F6VAN0 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.39□□□□□ -0.27
Atf6F6VAN0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.39□□□□□ -0.27
Atf6F6VAN0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.38□□□□□ -0.27
Atf6F6VAN0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.38□□□□□ -0.27
Atf6F6VAN0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.38□□□□□ -0.27
Atf6F6VAN0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.38□□□□□ -0.27
Atf6F6VAN0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Gm16372-201ENSMUST00000073088 450 ntBASIC13.38□□□□□ -0.27
Atf6F6VAN0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.38□□□□□ -0.27
Atf6F6VAN0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atf6F6VAN0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.37□□□□□ -0.27
Atf6F6VAN0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Gm6458-201ENSMUST00000211573 635 ntBASIC13.37□□□□□ -0.27
Atf6F6VAN0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atf6F6VAN0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atf6F6VAN0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atf6F6VAN0 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.36□□□□□ -0.27
Atf6F6VAN0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atf6F6VAN0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Atf6F6VAN0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.36□□□□□ -0.27
Atf6F6VAN0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atf6F6VAN0 Gm12138-201ENSMUST00000122180 951 ntBASIC13.36□□□□□ -0.27
Atf6F6VAN0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Atf6F6VAN0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Atf6F6VAN0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.36□□□□□ -0.27
Atf6F6VAN0 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.36□□□□□ -0.27
Atf6F6VAN0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Atf6F6VAN0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.36□□□□□ -0.27
Atf6F6VAN0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.36□□□□□ -0.27
Atf6F6VAN0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms