Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.69□□□□□ -0.7
Trav18A0A075B656 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.69□□□□□ -0.7
Trav18A0A075B656 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Gm42612-201ENSMUST00000197986 623 ntBASIC10.68□□□□□ -0.7
Trav18A0A075B656 Gm43170-201ENSMUST00000199827 612 ntBASIC10.68□□□□□ -0.7
Trav18A0A075B656 Gm44872-201ENSMUST00000207864 420 ntBASIC10.68□□□□□ -0.7
Trav18A0A075B656 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav18A0A075B656 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.68□□□□□ -0.7
Trav18A0A075B656 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.68□□□□□ -0.7
Trav18A0A075B656 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Trav18A0A075B656 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav18A0A075B656 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Gm13689-201ENSMUST00000119360 685 ntBASIC10.67□□□□□ -0.7
Trav18A0A075B656 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.67□□□□□ -0.7
Trav18A0A075B656 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Gm5354-201ENSMUST00000182417 973 ntBASIC10.67□□□□□ -0.7
Trav18A0A075B656 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.67□□□□□ -0.7
Trav18A0A075B656 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.67□□□□□ -0.7
Trav18A0A075B656 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav18A0A075B656 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.66□□□□□ -0.7
Trav18A0A075B656 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms