Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Morn2-202ENSMUST00000227729 656 ntBASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Gm43758-201ENSMUST00000199500 367 ntBASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcb1Q9Z0H3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Gm11964-201ENSMUST00000120982 444 ntBASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Gm24526-201ENSMUST00000082921 158 ntBASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Acot6-202ENSMUST00000222921 3622 ntBASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcb1Q9Z0H3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms