Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf40aQ9R1C7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Gm11478-201ENSMUST00000117851 599 ntBASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Gm7287-201ENSMUST00000205267 602 ntBASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Gm7653-201ENSMUST00000214567 508 ntBASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40aQ9R1C7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Mir1894-201ENSMUST00000122802 81 ntBASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Gm21156-201ENSMUST00000189693 869 ntBASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Gm45841-201ENSMUST00000207700 164 ntBASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Gm5356-201ENSMUST00000093326 615 ntBASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40aQ9R1C7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Prpf40aQ9R1C7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms