Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Gm21092-201ENSMUST00000178995 955 ntBASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a4Q9QZR9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Gm24891-201ENSMUST00000104391 136 ntBASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Gm14219-201ENSMUST00000120414 288 ntBASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Gm12516-201ENSMUST00000120819 385 ntBASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Gm7902-201ENSMUST00000198842 947 ntBASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a4Q9QZR9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a4Q9QZR9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a4Q9QZR9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col4a4Q9QZR9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a4Q9QZR9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a4Q9QZR9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a4Q9QZR9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.71□□□□□ -0.38
Col4a4Q9QZR9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a4Q9QZR9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a4Q9QZR9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col4a4Q9QZR9 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm13916-201ENSMUST00000117368 628 ntBASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm13263-201ENSMUST00000121271 838 ntBASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm22877-201ENSMUST00000175451 105 ntBASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm5100-201ENSMUST00000195631 589 ntBASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm19091-201ENSMUST00000208120 978 ntBASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms