Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Gm16215-201ENSMUST00000161990 637 ntBASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Gm15770-201ENSMUST00000117498 584 ntBASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Gm27772-201ENSMUST00000184900 187 ntBASIC12.24□□□□□ -0.45
Trim39Q9ESN2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.24□□□□□ -0.45
Trim39Q9ESN2 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim39Q9ESN2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim39Q9ESN2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim39Q9ESN2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim39Q9ESN2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim39Q9ESN2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim39Q9ESN2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim39Q9ESN2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim39Q9ESN2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim39Q9ESN2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms