Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm13888-201ENSMUST00000119148 422 ntBASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm13736-201ENSMUST00000119272 253 ntBASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm6963-201ENSMUST00000147879 379 ntBASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm23363-201ENSMUST00000175024 79 ntBASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Gm32999-201ENSMUST00000192693 562 ntBASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Gm37666-201ENSMUST00000194110 866 ntBASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-4Q9EQM3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Mir6958-201ENSMUST00000184207 73 ntBASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Gm10179-201ENSMUST00000086233 688 ntBASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-4Q9EQM3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms