Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Gm17330-201ENSMUST00000221047 165 ntBASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d4aQ9D7V1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Gm22175-201ENSMUST00000175007 78 ntBASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Gm27702-201ENSMUST00000184512 56 ntBASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d4aQ9D7V1 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Gm4875-201ENSMUST00000118257 786 ntBASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh2d4aQ9D7V1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms