Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.35□□□□□ -0.11
Cfap53Q9D439 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Gm16202-201ENSMUST00000117532 544 ntBASIC14.34□□□□□ -0.11
Cfap53Q9D439 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cfap53Q9D439 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.34□□□□□ -0.11
Cfap53Q9D439 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.34□□□□□ -0.11
Cfap53Q9D439 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.34□□□□□ -0.11
Cfap53Q9D439 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.34□□□□□ -0.11
Cfap53Q9D439 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.34□□□□□ -0.11
Cfap53Q9D439 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap53Q9D439 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cfap53Q9D439 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cfap53Q9D439 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Gm38671-201ENSMUST00000200573 130 ntBASIC14.33□□□□□ -0.12
Cfap53Q9D439 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Gm8463-201ENSMUST00000208573 613 ntBASIC14.33□□□□□ -0.12
Cfap53Q9D439 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Gm45384-201ENSMUST00000210451 277 ntBASIC14.33□□□□□ -0.12
Cfap53Q9D439 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.33□□□□□ -0.12
Cfap53Q9D439 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap53Q9D439 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.33□□□□□ -0.12
Cfap53Q9D439 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.32□□□□□ -0.12
Cfap53Q9D439 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.32□□□□□ -0.12
Cfap53Q9D439 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.32□□□□□ -0.12
Cfap53Q9D439 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.32□□□□□ -0.12
Cfap53Q9D439 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cfap53Q9D439 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms