Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Paupar-201ENSMUST00000194826 3482 ntBASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Gm13392-201ENSMUST00000117708 150 ntBASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Gm14660-201ENSMUST00000119809 575 ntBASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Gm7561-201ENSMUST00000211203 886 ntBASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc1aQ9CU62 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Gm15371-201ENSMUST00000117057 784 ntBASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Gm27731-201ENSMUST00000185192 107 ntBASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Gm10478-201ENSMUST00000084451 396 ntBASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Gm6091-201ENSMUST00000098307 165 ntBASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc1aQ9CU62 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Gm29649-201ENSMUST00000185649 419 ntBASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Gm37424-201ENSMUST00000191727 561 ntBASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.59□□□□□ -0.07
Smc1aQ9CU62 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Gm6983-201ENSMUST00000214912 628 ntBASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc1aQ9CU62 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms