Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Gm18734-201ENSMUST00000172937 808 ntBASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Gm5070-201ENSMUST00000177599 862 ntBASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cldnd1Q9CQX5 Gm13813-201ENSMUST00000120998 787 ntBASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Gm6963-201ENSMUST00000147879 379 ntBASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Gm19459-201ENSMUST00000176240 835 ntBASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Gm9555-201ENSMUST00000200908 583 ntBASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.27□□□□□ -0.29
Cldnd1Q9CQX5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Gm13408-201ENSMUST00000119822 798 ntBASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Gm8566-201ENSMUST00000120174 465 ntBASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Gm13935-201ENSMUST00000121859 798 ntBASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Gm32999-201ENSMUST00000192693 562 ntBASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms