Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 AC154186.1-201ENSMUST00000227711 1597 ntBASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg3Q9CQV4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Gm18871-201ENSMUST00000218655 745 ntBASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 AC132384.6-201ENSMUST00000218976 1206 ntBASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg3Q9CQV4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Gm36966-201ENSMUST00000192217 413 ntBASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 AC160962.2-201ENSMUST00000224761 632 ntBASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Ermard-209ENSMUST00000226561 1019 ntBASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms