Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb1Q9CQ70 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Itm2b-204ENSMUST00000228637 783 ntBASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
H2afb1Q9CQ70 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Mir7654-201ENSMUST00000185082 70 ntBASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Gm44855-201ENSMUST00000205725 362 ntBASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.68□□□□□ -0.7
H2afb1Q9CQ70 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms