Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm29608-201ENSMUST00000190444 463 ntBASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm43916-201ENSMUST00000205062 967 ntBASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Gm15547-201ENSMUST00000122152 333 ntBASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Gm19353-201ENSMUST00000184561 445 ntBASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Gm37028-201ENSMUST00000194276 107 ntBASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Mt1-202ENSMUST00000211807 1085 ntBASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.51□□□□□ -0.25
Col25a1Q99MQ5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Gm13045-201ENSMUST00000119019 712 ntBASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Gm6630-201ENSMUST00000119199 454 ntBASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Gm10051-201ENSMUST00000145209 414 ntBASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Gm7003-201ENSMUST00000195089 312 ntBASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Gm45550-201ENSMUST00000209380 946 ntBASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Gm19163-201ENSMUST00000223313 780 ntBASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col25a1Q99MQ5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms