Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Gm11524-201ENSMUST00000119349 807 ntBASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Gm15487-201ENSMUST00000122373 465 ntBASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Mir8102-201ENSMUST00000184148 139 ntBASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkd1Q99MH6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm12151-201ENSMUST00000121374 290 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm21854-201ENSMUST00000179901 471 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Mir7684-201ENSMUST00000183858 60 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm29608-201ENSMUST00000190444 463 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm19078-201ENSMUST00000206311 727 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkd1Q99MH6 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Gm15376-201ENSMUST00000122258 783 ntBASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Gm26464-201ENSMUST00000157094 305 ntBASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Gm28760-201ENSMUST00000185995 736 ntBASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Gm29667-201ENSMUST00000190817 490 ntBASIC12.29□□□□□ -0.44
Nkd1Q99MH6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms