Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm6161-201ENSMUST00000121942 1102 ntBASIC15□□□□□ -0.01
Rfc4Q99J62 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rfc4Q99J62 Gm6254-201ENSMUST00000168178 1072 ntBASIC15□□□□□ -0.01
Rfc4Q99J62 Gm6153-201ENSMUST00000172004 1058 ntBASIC15□□□□□ -0.01
Rfc4Q99J62 Gm22121-201ENSMUST00000175148 54 ntBASIC15□□□□□ -0.01
Rfc4Q99J62 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rfc4Q99J62 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15□□□□□ -0.01
Rfc4Q99J62 Gm5641-202ENSMUST00000198699 1080 ntBASIC15□□□□□ -0.01
Rfc4Q99J62 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rfc4Q99J62 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rfc4Q99J62 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rfc4Q99J62 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Rfc4Q99J62 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.99□□□□□ -0.01
Rfc4Q99J62 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Snord83b-201ENSMUST00000104546 94 ntBASIC14.99□□□□□ -0.01
Rfc4Q99J62 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Gm14028-201ENSMUST00000117434 479 ntBASIC14.99□□□□□ -0.01
Rfc4Q99J62 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.99□□□□□ -0.01
Rfc4Q99J62 Gm12176-201ENSMUST00000121420 875 ntBASIC14.99□□□□□ -0.01
Rfc4Q99J62 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.99□□□□□ -0.01
Rfc4Q99J62 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.99□□□□□ -0.01
Rfc4Q99J62 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.99□□□□□ -0.01
Rfc4Q99J62 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.99□□□□□ -0.01
Rfc4Q99J62 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc4Q99J62 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rfc4Q99J62 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Gm11930-201ENSMUST00000117788 190 ntBASIC14.98□□□□□ -0.01
Rfc4Q99J62 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfc4Q99J62 B9d1os-201ENSMUST00000137010 674 ntBASIC14.98□□□□□ -0.01
Rfc4Q99J62 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Mir5120-201ENSMUST00000175020 78 ntBASIC14.98□□□□□ -0.01
Rfc4Q99J62 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.98□□□□□ -0.01
Rfc4Q99J62 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.98□□□□□ -0.01
Rfc4Q99J62 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.98□□□□□ -0.01
Rfc4Q99J62 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc4Q99J62 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms