Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Smc1bQ920F6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.08■□□□□ 0
Smc1bQ920F6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Smc1bQ920F6 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.07■□□□□ 0
Smc1bQ920F6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Smc1bQ920F6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.07■□□□□ 0
Smc1bQ920F6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Mir698-201ENSMUST00000102164 109 ntBASIC15.07■□□□□ 0
Smc1bQ920F6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smc1bQ920F6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smc1bQ920F6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smc1bQ920F6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smc1bQ920F6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smc1bQ920F6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smc1bQ920F6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Gm12997-201ENSMUST00000120207 640 ntBASIC15.07■□□□□ 0
Smc1bQ920F6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.07■□□□□ 0
Smc1bQ920F6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.07■□□□□ 0
Smc1bQ920F6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.07■□□□□ 0
Smc1bQ920F6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.07■□□□□ 0
Smc1bQ920F6 Gm25261-201ENSMUST00000157416 134 ntBASIC15.07■□□□□ 0
Smc1bQ920F6 Gm16379-201ENSMUST00000161469 348 ntBASIC15.07■□□□□ 0
Smc1bQ920F6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Gm8762-201ENSMUST00000193486 339 ntBASIC15.07■□□□□ 0
Smc1bQ920F6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Smc1bQ920F6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smc1bQ920F6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smc1bQ920F6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.07■□□□□ 0
Smc1bQ920F6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Smc1bQ920F6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.07■□□□□ 0
Smc1bQ920F6 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.07■□□□□ 0
Smc1bQ920F6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.07■□□□□ 0
Smc1bQ920F6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc1bQ920F6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Smc1bQ920F6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Smc1bQ920F6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Smc1bQ920F6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.06■□□□□ 0
Smc1bQ920F6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.06■□□□□ 0
Smc1bQ920F6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.06■□□□□ 0
Smc1bQ920F6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smc1bQ920F6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smc1bQ920F6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.06■□□□□ 0
Smc1bQ920F6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.06■□□□□ 0
Smc1bQ920F6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Gm2991-201ENSMUST00000173338 480 ntBASIC15.06■□□□□ 0
Smc1bQ920F6 Gm37922-201ENSMUST00000195596 455 ntBASIC15.06■□□□□ 0
Smc1bQ920F6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.06■□□□□ 0
Smc1bQ920F6 Gm8227-201ENSMUST00000223306 571 ntBASIC15.06■□□□□ 0
Smc1bQ920F6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.06■□□□□ 0
Smc1bQ920F6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.06■□□□□ 0
Smc1bQ920F6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smc1bQ920F6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smc1bQ920F6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.06■□□□□ 0
Smc1bQ920F6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.06■□□□□ 0
Smc1bQ920F6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.06■□□□□ 0
Smc1bQ920F6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc1bQ920F6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Smc1bQ920F6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms