Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Gm15957-201ENSMUST00000118893 974 ntBASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 AA619741-201ENSMUST00000195095 646 ntBASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Gm37017-201ENSMUST00000195266 747 ntBASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Gm44251-201ENSMUST00000204963 442 ntBASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Gm19540-201ENSMUST00000221843 810 ntBASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb3Q91XZ7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Gm24543-201ENSMUST00000103867 82 ntBASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Gm37604-201ENSMUST00000191749 1272 ntBASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Gm37641-201ENSMUST00000193837 239 ntBASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Gm9063-201ENSMUST00000223299 582 ntBASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb3Q91XZ7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Gm44344-201ENSMUST00000200287 129 ntBASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms