Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Gm5866-201ENSMUST00000177881 973 ntBASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Mir7654-201ENSMUST00000185082 70 ntBASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.94□□□□□ -0.66
H1fooQ8VIK3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.94□□□□□ -0.66
H1fooQ8VIK3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Gm15429-201ENSMUST00000151268 798 ntBASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Gm44397-201ENSMUST00000195950 113 ntBASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H1fooQ8VIK3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms