Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.91□□□□□ -0.18
TraipQ8VIG6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.91□□□□□ -0.18
TraipQ8VIG6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TraipQ8VIG6 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.9□□□□□ -0.18
TraipQ8VIG6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.9□□□□□ -0.18
TraipQ8VIG6 AC129336.1-201ENSMUST00000220224 2277 ntBASIC13.9□□□□□ -0.18
TraipQ8VIG6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Gm13492-201ENSMUST00000119772 665 ntBASIC13.9□□□□□ -0.18
TraipQ8VIG6 Gm13316-201ENSMUST00000140537 691 ntBASIC13.9□□□□□ -0.18
TraipQ8VIG6 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.9□□□□□ -0.18
TraipQ8VIG6 Gm6621-201ENSMUST00000193251 772 ntBASIC13.9□□□□□ -0.18
TraipQ8VIG6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.9□□□□□ -0.18
TraipQ8VIG6 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.9□□□□□ -0.18
TraipQ8VIG6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TraipQ8VIG6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.9□□□□□ -0.19
TraipQ8VIG6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.19
TraipQ8VIG6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Gm23363-201ENSMUST00000175024 79 ntBASIC13.89□□□□□ -0.19
TraipQ8VIG6 Gm7584-201ENSMUST00000175829 940 ntBASIC13.89□□□□□ -0.19
TraipQ8VIG6 Gm38092-201ENSMUST00000195600 653 ntBASIC13.89□□□□□ -0.19
TraipQ8VIG6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.89□□□□□ -0.19
TraipQ8VIG6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TraipQ8VIG6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TraipQ8VIG6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.88□□□□□ -0.19
TraipQ8VIG6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TraipQ8VIG6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TraipQ8VIG6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TraipQ8VIG6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TraipQ8VIG6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TraipQ8VIG6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TraipQ8VIG6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TraipQ8VIG6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.88□□□□□ -0.19
TraipQ8VIG6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TraipQ8VIG6 Gm12502-201ENSMUST00000120197 444 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms