Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Gm6447-201ENSMUST00000118905 835 ntBASIC13.51□□□□□ -0.25
Trim60Q8VI40 Gm14719-201ENSMUST00000121891 340 ntBASIC13.51□□□□□ -0.25
Trim60Q8VI40 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.51□□□□□ -0.25
Trim60Q8VI40 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.51□□□□□ -0.25
Trim60Q8VI40 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.5□□□□□ -0.25
Trim60Q8VI40 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.5□□□□□ -0.25
Trim60Q8VI40 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim60Q8VI40 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.49□□□□□ -0.25
Trim60Q8VI40 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.49□□□□□ -0.25
Trim60Q8VI40 Gm19220-201ENSMUST00000222682 803 ntBASIC13.49□□□□□ -0.25
Trim60Q8VI40 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.49□□□□□ -0.25
Trim60Q8VI40 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.49□□□□□ -0.25
Trim60Q8VI40 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms