Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh18Q8VHR0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh18Q8VHR0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Gm12585-201ENSMUST00000117307 290 ntBASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Gm14767-201ENSMUST00000121559 586 ntBASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh18Q8VHR0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm3436-201ENSMUST00000179930 840 ntBASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm27618-201ENSMUST00000183671 60 ntBASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm17837-201ENSMUST00000186435 985 ntBASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm6888-201ENSMUST00000221983 706 ntBASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh18Q8VHR0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms