Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm44069-201ENSMUST00000204898 506 ntBASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Mir686-201ENSMUST00000102174 109 ntBASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Gm19184-201ENSMUST00000196798 928 ntBASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.32□□□□□ -0.44
Ndc1Q8VCB1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Gm37444-201ENSMUST00000193605 439 ntBASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Gm18054-201ENSMUST00000207539 555 ntBASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms