Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lsm1Q8VC85 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm1Q8VC85 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lsm1Q8VC85 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Lsm1Q8VC85 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm1Q8VC85 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm1Q8VC85 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm1Q8VC85 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.52□□□□□ -0.4
Lsm1Q8VC85 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm1Q8VC85 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.52□□□□□ -0.4
Lsm1Q8VC85 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm1Q8VC85 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Gm44397-201ENSMUST00000195950 113 ntBASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Gm18307-201ENSMUST00000206864 949 ntBASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Gm6983-201ENSMUST00000214912 628 ntBASIC12.51□□□□□ -0.41
Lsm1Q8VC85 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm1Q8VC85 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.51□□□□□ -0.41
Lsm1Q8VC85 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms