Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Gm45496-201ENSMUST00000209918 2917 ntBASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Gm15678-201ENSMUST00000117573 960 ntBASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.67■□□□□ 0.1
Ccdc9Q8VC31 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gm7642-201ENSMUST00000216345 1809 ntBASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 CT010480.4-201ENSMUST00000224654 2283 ntBASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gm37542-201ENSMUST00000192563 2832 ntBASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc9Q8VC31 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Gm43075-201ENSMUST00000198613 3905 ntBASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc9Q8VC31 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ccdc9Q8VC31 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Ccdc9Q8VC31 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms