Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Vps39Q8R5L3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps39Q8R5L3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps39Q8R5L3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Vps39Q8R5L3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Vps39Q8R5L3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Vps39Q8R5L3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.08□□□□□ -0.32
Vps39Q8R5L3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps39Q8R5L3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Itm2b-204ENSMUST00000228637 783 ntBASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps39Q8R5L3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.06□□□□□ -0.32
Vps39Q8R5L3 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms