Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Mir5120-201ENSMUST00000175020 78 ntBASIC18.32■□□□□ 0.52
Cd109Q8R422 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cd109Q8R422 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cd109Q8R422 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC18.32■□□□□ 0.52
Cd109Q8R422 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cd109Q8R422 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.32■□□□□ 0.52
Cd109Q8R422 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cd109Q8R422 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC18.32■□□□□ 0.52
Cd109Q8R422 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 CT025610.1-201ENSMUST00000224552 1786 ntBASIC18.32■□□□□ 0.52
Cd109Q8R422 Gm5846-201ENSMUST00000193146 1414 ntBASIC18.32■□□□□ 0.52
Cd109Q8R422 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Cd109Q8R422 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC18.32■□□□□ 0.52
Cd109Q8R422 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Mir6927-201ENSMUST00000184494 71 ntBASIC18.32■□□□□ 0.52
Cd109Q8R422 Gm43138-201ENSMUST00000199123 708 ntBASIC18.32■□□□□ 0.52
Cd109Q8R422 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC18.32■□□□□ 0.52
Cd109Q8R422 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd109Q8R422 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cd109Q8R422 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC18.31■□□□□ 0.52
Cd109Q8R422 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC18.31■□□□□ 0.52
Cd109Q8R422 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Gm9924-202ENSMUST00000192760 2311 ntBASIC18.31■□□□□ 0.52
Cd109Q8R422 Gm23200-201ENSMUST00000104379 132 ntBASIC18.31■□□□□ 0.52
Cd109Q8R422 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cd109Q8R422 Gm11597-201ENSMUST00000121423 964 ntBASIC18.31■□□□□ 0.52
Cd109Q8R422 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Gm8913-201ENSMUST00000209491 641 ntBASIC18.31■□□□□ 0.52
Cd109Q8R422 Nsd1-205ENSMUST00000224693 852 ntBASIC18.31■□□□□ 0.52
Cd109Q8R422 Gzmn-202ENSMUST00000225535 989 ntBASIC18.31■□□□□ 0.52
Cd109Q8R422 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd109Q8R422 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cd109Q8R422 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Cd109Q8R422 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cd109Q8R422 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cd109Q8R422 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.3■□□□□ 0.52
Cd109Q8R422 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cd109Q8R422 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cd109Q8R422 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cd109Q8R422 Gm45495-201ENSMUST00000200940 1700 ntBASIC18.3■□□□□ 0.52
Cd109Q8R422 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd109Q8R422 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms