Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Gm17795-201ENSMUST00000214505 757 ntBASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Gm24447-201ENSMUST00000083977 338 ntBASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Nudcd3Q8R1N4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Gm5161-201ENSMUST00000075243 853 ntBASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Pck2-205ENSMUST00000226352 2784 ntBASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.03□□□□□ -0.32
Nudcd3Q8R1N4 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Matn2-203ENSMUST00000226766 3252 ntBASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nudcd3Q8R1N4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms