Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afjQ8R1M2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Gm12485-201ENSMUST00000119641 291 ntBASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Gm9797-201ENSMUST00000052902 613 ntBASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afjQ8R1M2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.12□□□□□ -0.47
H2afjQ8R1M2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Gm12151-201ENSMUST00000121374 290 ntBASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afjQ8R1M2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms