Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Gm37246-201ENSMUST00000192665 835 ntBASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 AC159205.5-202ENSMUST00000224849 386 ntBASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 CT030637.1-201ENSMUST00000228016 669 ntBASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Mir680-2-201ENSMUST00000102163 110 ntBASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Gm23251-201ENSMUST00000103773 110 ntBASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Gm13035-201ENSMUST00000117496 342 ntBASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Gm1821-202ENSMUST00000227415 750 ntBASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Ddx54Q8K4L0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Mir6546-201ENSMUST00000184460 62 ntBASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Gm28324-201ENSMUST00000187913 264 ntBASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Gm25517-201ENSMUST00000083865 134 ntBASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx54Q8K4L0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Gm28882-201ENSMUST00000185504 314 ntBASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms