Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trnt1Q8K1J6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trnt1Q8K1J6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trnt1Q8K1J6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trnt1Q8K1J6 Rubie-203ENSMUST00000227803 2430 ntBASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trnt1Q8K1J6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trnt1Q8K1J6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms