Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip4Q8CI96 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Gm38223-201ENSMUST00000194484 695 ntBASIC13.15□□□□□ -0.3
Clip4Q8CI96 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip4Q8CI96 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Clip4Q8CI96 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Clip4Q8CI96 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Clip4Q8CI96 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Gm6983-201ENSMUST00000214912 628 ntBASIC13.14□□□□□ -0.31
Clip4Q8CI96 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Gm17330-201ENSMUST00000221047 165 ntBASIC13.14□□□□□ -0.31
Clip4Q8CI96 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.14□□□□□ -0.31
Clip4Q8CI96 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.14□□□□□ -0.31
Clip4Q8CI96 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.14□□□□□ -0.31
Clip4Q8CI96 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clip4Q8CI96 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clip4Q8CI96 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Clip4Q8CI96 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms