Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3h3Q8CHP0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3h3Q8CHP0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3h3Q8CHP0 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Gm14999-201ENSMUST00000121039 624 ntBASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Gm23153-201ENSMUST00000175323 313 ntBASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3h3Q8CHP0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Mir6546-201ENSMUST00000184460 62 ntBASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3h3Q8CHP0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Zc3h3Q8CHP0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms