Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rdh1Q8CGV4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Gm8738-201ENSMUST00000172606 329 ntBASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Gm43822-201ENSMUST00000200285 476 ntBASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Gm10608-202ENSMUST00000213924 676 ntBASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rdh1Q8CGV4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Gm13786-201ENSMUST00000122371 333 ntBASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Gm6334-201ENSMUST00000207083 228 ntBASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Cts7-204ENSMUST00000225321 1257 ntBASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rdh1Q8CGV4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Rdh1Q8CGV4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rdh1Q8CGV4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rdh1Q8CGV4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rdh1Q8CGV4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rdh1Q8CGV4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.64□□□□□ -0.39
Rdh1Q8CGV4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.64□□□□□ -0.39
Rdh1Q8CGV4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rdh1Q8CGV4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rdh1Q8CGV4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rdh1Q8CGV4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rdh1Q8CGV4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rdh1Q8CGV4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rdh1Q8CGV4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms