Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rbm28Q8CGC6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Gm8805-201ENSMUST00000117848 313 ntBASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbm28Q8CGC6 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Gm42627-201ENSMUST00000197347 224 ntBASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbm28Q8CGC6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rbm28Q8CGC6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbm28Q8CGC6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rbm28Q8CGC6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbm28Q8CGC6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rbm28Q8CGC6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rbm28Q8CGC6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms