Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph6aQ8CDR2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph6aQ8CDR2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph6aQ8CDR2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Gm11964-201ENSMUST00000120982 444 ntBASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Gm4857-201ENSMUST00000192718 785 ntBASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph6aQ8CDR2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph6aQ8CDR2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Gm14740-201ENSMUST00000118538 1150 ntBASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Gm37660-201ENSMUST00000192754 1732 ntBASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.01■□□□□ 0.31
Rsph6aQ8CDR2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Gm18916-201ENSMUST00000198264 1246 ntBASIC17■□□□□ 0.31
Rsph6aQ8CDR2 CT009495.1-201ENSMUST00000224221 862 ntBASIC17■□□□□ 0.31
Rsph6aQ8CDR2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Rsph6aQ8CDR2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms