Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Gm8927-201ENSMUST00000181978 981 ntBASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Gm6916-202ENSMUST00000205523 195 ntBASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Gm3222-201ENSMUST00000071282 990 ntBASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lrif1Q8CDD9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lrif1Q8CDD9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lrif1Q8CDD9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lrif1Q8CDD9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.9□□□□□ -0.34
Lrif1Q8CDD9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lrif1Q8CDD9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lrif1Q8CDD9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lrif1Q8CDD9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lrif1Q8CDD9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lrif1Q8CDD9 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.9□□□□□ -0.34
Lrif1Q8CDD9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms