Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Gm22175-201ENSMUST00000175007 78 ntBASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Gm29608-201ENSMUST00000190444 463 ntBASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lysmd4Q8CC84 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Gm12485-201ENSMUST00000119641 291 ntBASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lysmd4Q8CC84 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms