Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Gm38266-201ENSMUST00000194931 421 ntBASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Gm18753-201ENSMUST00000201000 566 ntBASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Gm45930-201ENSMUST00000221330 292 ntBASIC15.09■□□□□ 0.01
Shisa4Q8CA71 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Shisa4Q8CA71 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Shisa4Q8CA71 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Shisa4Q8CA71 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Shisa4Q8CA71 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Shisa4Q8CA71 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Shisa4Q8CA71 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.08■□□□□ 0
Shisa4Q8CA71 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.08■□□□□ 0
Shisa4Q8CA71 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.08■□□□□ 0
Shisa4Q8CA71 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.08■□□□□ 0
Shisa4Q8CA71 Gm43133-201ENSMUST00000197472 463 ntBASIC15.08■□□□□ 0
Shisa4Q8CA71 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.08■□□□□ 0
Shisa4Q8CA71 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.08■□□□□ 0
Shisa4Q8CA71 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.08■□□□□ 0
Shisa4Q8CA71 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.08■□□□□ 0
Shisa4Q8CA71 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.08■□□□□ 0
Shisa4Q8CA71 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Shisa4Q8CA71 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.08■□□□□ 0
Shisa4Q8CA71 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.08■□□□□ 0
Shisa4Q8CA71 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shisa4Q8CA71 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.08■□□□□ 0
Shisa4Q8CA71 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.08■□□□□ 0
Shisa4Q8CA71 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.07■□□□□ 0
Shisa4Q8CA71 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.07■□□□□ 0
Shisa4Q8CA71 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Gm13316-201ENSMUST00000140537 691 ntBASIC15.07■□□□□ 0
Shisa4Q8CA71 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.07■□□□□ 0
Shisa4Q8CA71 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Gm8099-201ENSMUST00000200510 742 ntBASIC15.07■□□□□ 0
Shisa4Q8CA71 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.07■□□□□ 0
Shisa4Q8CA71 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.07■□□□□ 0
Shisa4Q8CA71 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.07■□□□□ 0
Shisa4Q8CA71 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.07■□□□□ 0
Shisa4Q8CA71 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Shisa4Q8CA71 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shisa4Q8CA71 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Shisa4Q8CA71 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.06■□□□□ 0
Shisa4Q8CA71 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms